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Jan 14, 20261 min read

Protocols and other information mostly of interest to our research group.

Basics

  • Starting to work in the MEC group
  • Maintaining lab notes
  • How to mark your material
  • Autoclaving
  • Yeast and bacterial freezer stocks
  • LGM
  • Congresses
  • Dept phone directory
  • TEACHING

Commonly used protocols

  • Yeast transformation
  • E. coli transformation
  • PCR
  • Microwave Yeast Colony PCR ◀️ This is the fastest protocol
  • NaOH Yeast Colony PCR ◀️ This more work, but robust
  • Yeast genomic DNA extraction with LiOAc SDS ◀️ This more work, but robust
  • Agarose gel
  • Plasmid miniprep with home made buffers
  • Plasmid rescue from yeast to E. coli
  • Making LB medium.
  • Making YPD medium.
  • Making defined SC or SD medium .

The Yeast Pathway Kit

  • The Yeast Pathway Kit
  • pYPKa cloning protocol
  • Transcription Unit cloning protocol
  • standard_primers
  • primer design
  • in silico assembly of pYPKa_A_ATF1
  • in silico assembly of pTA1_TDH3_ATF1_PGI1
  • Plasmids, Promoters & Terminators sequence files.

Miscellaneous

  • Tools
  • Render Jupyter notebook in your browser
  • Elitech RC-5 Temperature Data Logger

Graph View

  • Basics
  • Commonly used protocols
  • The Yeast Pathway Kit
  • Miscellaneous

Backlinks

  • Metabolic Engineering CBMA

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